Intro
Noorudin and his team (Maulvi Abdul Kareem and Mufti Sadiq) believed that Esa (as) had a biological father before they had ever met Mirza Ghulam Ahmad, they took this new belief from Sir Syed, who wrote it in 1880. They all worked together in Jammu, with Noorudin being the boss. Nevertheless, Noorudin and his team held the belief that Esa (as) had a biological father until 1903, wherein it is reported by Noorudin himself that he was forced to change his position on the order of MGA. However, after MGA died, per Lahori-Ahmadi sources, Noorudin ordered Muhammad Ali to write in his commentary of the Quran that Esa (As) had a biological father.   The Qadiani branch went on to call the miraculous birth of Esa (as) as less then a miracle and some sort of rationally explained phenomenon. Obviously, the classic islamic view is that Esa (as) was born miraculously, just like Adam (as). By the will of Allah.  
_____________________________________________________________________________________________The Quotes

 “Once Hazrat Mirza asked Shaikh Qamar-ud-Din of Jhelum to show him the verses of the Quran from which the Shaikh had concluded that Jesus had a father. At first, the Shaikh sahib, out of respect for Hazrat Mirza, remained silent. But upon Hazrat Mirza repeating the question, he mentioned the arguments from the Quran that he knew. Hearing the arguments, Hazrat Mirza said: ‘Your arguments are certainly strong, but until God gives me to understand this point, I will follow the views of the majority of Muslims’. … Hazrat Mirza said to Hakim Fazal Din [who had complained about Shaikh sahib’s belief]: ‘How can you declare as heretic someone who bases his arguments on the Quran?’” (Mujaddid e Azam Vol.2 Pg.1342).

”Molvi Nooruddin held the same belief and he once told me that ‘The only reason I stay silent about this issue is because MGA believes otherwise.’  (Footnote) But after the death of MGA, Molvi Nooruddin became the Khalifa and he specifically instructed Molvi Muhammad Ali to write that Jesus had a father in his English commentary of the Qur’an” (Mujaddid e Azam Vol.2 Pg.1342).
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The scans

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Links and Related Essays

https://ahmadiyyafactcheckblog.com/2017/01/25/mirza-ghulam-ahmad-and-his-team-went-back-and-forth-in-terms-of-if-jesus-had-a-biological-father-or-not/

Mirza Ghulam Ahmad and his team went back and forth in terms of if Jesus had a biological father or not

Maulvi Nooruddin secretly disagreed with Mirza Ghulam Ahmad on the birth of Esa (as)

http://www.muslim.org/books/f-ahm-mv/ch12.htm#u

Muhammad Ali (the Lahori-Ahmadi) denies the miraculous birth of Esa (as) in 1917

http://www.muslim.org/sa-case/evidence/s16.htm
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