Noorudin and his team (Maulvi Abdul Kareem and Mufti Sadiq) believed that Esa (as) had a biological father before they had ever met Mirza Ghulam Ahmad, they took this new belief from Sir Syed, who wrote it in 1880. They all worked together in Jammu, with Noorudin being the boss. Nonetheless, Noorudin and his team held the belief that Esa (as) had a biological father until 1903, wherein it is reported by Noorudin himself that he was forced to change his position on the order of MGA. However, after MGA died, per Lahori-Ahmadi sources, Noorudin ordered Muhammad Ali to write in his commentary of the Quran that Esa (As) had a biological father.  The Qadiani branch went on to call the miraculous birth of Esa (as) as less then a miracle and some sort of rationally explained phenomenon. Obviously, the classic islamic view is that Esa (as) was born miraculously, just like Adam (as). By the will of Allah.
_____________________________________________________________________________________________The Quote

In his famous english commentary he writes about 3:58:

“”In either case there is no reference to Jesus being brought into existence without the agency of a parent”  (see page 161, 3:58)

Another quote from his urdu commentary on the Quran
(Bayan al-Quran, footnote 427 under verse 3:46)

“Christians believe in the virgin birth of Jesus, and so do Muslims generally. But there are Christians who do not believe this, and also Muslims who do not. There is, however, one difference. If, in fact, Jesus was not born without a father, it does not have any effect on any religious belief of the Muslims because it is not part of their faith to believe in the virgin birth. But the very foundations of the structure of Christianity are uprooted if it cannot be proved that Jesus was born without a father. For if he had a father, then Mary did not conceive of the Holy Spirit, nor was Jesus divine, nor is the doctrine of atonement correct.

“So, Jesus not being born of a virgin uproots Christianity altogether, but does no harm to Islam. A Muslim equally believes in the prophethood of Jesus, whether he had a father or not. He only wants to consider what the Holy Quran says, or what can be established from the Holy Prophet’s Sayings. If these record birth without a father, he will accept that, otherwise not. Nor would being born without a father show him to be superior to the prophets who had fathers because, for that matter, Adam and Eve had no father, and the Bible mentions Melchizedek who was ‘without father or mother’, see Hebrews 7:3. In this case, these three would be considered superior to Jesus. But, in fact, the very argument is wrong that one born without a father is superior.

“Besides this, a Muslim does not hold that Mary conceived from the Holy Spirit. If he was born without a father, this would merely be one of the wonders of creation, that Mary possessed both types of faculties. In fact, it is not even a miracle because it is necessary for a miracle that someone should be a witness or observer. But none except Mary could be a witness to her conceiving without a husband. What sort of a miracle would this be? So all we have to determine is what the Holy Quran and the Hadith disclose about this.

“God Himself says that He has put into effect the law for mankind that after the beginning this race propagates by the sperm, and He says that He makes man from the sperm of the male mixed with the female ovum. So unless God explicitly says that He created Jesus against this law of mating, and in a different manner, we would have to accept that the means which God brought about correspond to this law. There is no question here of whether God has the power to do such a thing or not. He can create someone without a father or a mother. The question is only whether it can be shown from the Holy Quran or authentic Hadith that God made Jesus without a father. When He Himself explains a law, then unless He Himself says that in a certain case He displayed His power as against that law, we cannot take something to have happened in breach of His law. So if some person concludes from the words of the Holy Quran that Jesus was born without a father, let him believe it. I do not draw this conclusion from the Quranic words. Though I do not consider this issue to be of any great importance, I think that it is a Muslim’s duty to make known his honestly and sincerely drawn conclusions from the Quran. Believing Jesus to have had a father, or believing him not to have had a father, does not affect our religious beliefs or practical actions in any way.”
_______________________________________________________________________________________________Links and Related Essays

Mirza Ghulam Ahmad and his team went back and forth in terms of if Jesus had a biological father or not

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